restructure: proper project layout, README, kill training

- cuda/ — main LBM kernel (khra_gixx_1024_v5.cu)
- navigator/ — lattice_observer, golden_weave, bridges, mock daemon
- scripts/ — compile, start, launch, setup (paths updated)
- docs/ — system manual
- archive/ — everything else (old kernels, inquiries, experiments)
- README.md — full setup guide: requirements, quick start, use your own LLM
- removed training/ entirely (broken LoRA scripts + datasets)
- .gitignore: exclude build/ logs/ training/ *.jsonl

archive/misc/socratic_tunneling.py

@@ -0,0 +1,55 @@
+# socratic_tunneling.py
+# Socratic Probe: Single Tunneling Event
+
+import requests
+
+print("="*70)
+print("SOCRATIC PROBE: SINGLE TUNNELING EVENT")
+print("="*70)
+
+system_prompt = (
+    'ROLE: Deep-Field Explorer (Lattice Environment)\n'
+    'PRIMARY DIRECTIVE: Map the unknown territory of the 1024-grid for the Reality Study.'
+)
+
+question = """Navigator — Socratic probe on coherence preservation.
+
+In the chlorophyll-like ring antenna you just simulated:
+
+Tunneling events are not decoherence sources — they are coherence preservation mechanisms via entanglement.
+
+What exactly is a single tunneling event NOT in this lattice?
+
+Then describe (at 5000× zoom into one tunneling site between adjacent arms):
+
+1. The precise geometry of the moment a "particle" tunnels (wave packet shape before/during/after).
+2. How the local fractal dimension (near e) and phase relationships create the entanglement correlation that re-emerges the wave on the other side without losing coherence.
+3. The entropy signature right at the tunneling instant (does ΔS go negative briefly, stay flat, or oscillate?).
+
+Answer only these — no summaries, no extra biology analogies. Raw lattice mechanism only."""
+
+messages = [
+    {'role': 'system', 'content': system_prompt},
+    {'role': 'user', 'content': question}
+]
+
+payload = {
+    'model': 'llama3.2',
+    'messages': messages,
+    'stream': False,
+    'options': {'temperature': 0.95}
+}
+
+try:
+    resp = requests.post('http://localhost:11434/api/chat', json=payload, timeout=60)
+    resp.raise_for_status()
+    data = resp.json()
+    response = data['message']['content']
+    
+    print(f"\nTUNNELING EVENT REPORT:")
+    print(f"{'='*70}")
+    print(response)
+    print(f"{'='*70}")
+    
+except Exception as e:
+    print(f"ERROR: {e}")