Tiger
339ad8e924
Add Documents: 4 papers, 5 scripts, 1 data file, 1 CSV
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Papers:
- phi_harmonic_energy_quantization_paper.md
- kolmogorov_turbulence_paper.md
- turing_pattern_paper.md (abstract fixed: geometric scaling, not power-of-2)
- four_forces_hypothesis.md
Scripts:
- beast-build/phi_harmonic_mapping.py
- beast-build/fractal_echo_hunt.py
- beast-build/kolmogorov_test.py
- beast-build/turing_analysis.py
- beast-build/four_forces_analysis.py
Data:
- phi_harmonic_spectrum.csv (3 energy levels)
- beast-build/sweep_results.csv (272 records)
2026-03-31 17:55:53 +07:00
Tiger
e467acd238
chore: remove MCP write test file
2026-03-30 18:05:19 +07:00
Tiger
c2ab14f868
test: verify GitHub MCP write access
2026-03-30 18:04:22 +07:00
Tiger
6bda504971
chore: remove root navigator_prime_analysis_v2.py (moved to scripts/)
2026-03-30 17:49:43 +07:00
Tiger
9f761f9b7d
chore: remove root navigator_prime_analysis.py (moved to scripts/)
2026-03-30 17:49:41 +07:00
Tiger
ea8cb99a50
chore: remove experimentation/experimental-verification.md (moved to docs/)
2026-03-30 17:49:39 +07:00
Tiger
30fb9161e0
chore: remove results/protein_fold_analysis.txt (moved to docs/)
2026-03-30 17:49:37 +07:00
Tiger
c268172acc
chore: reorganize repo structure
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- Move Navigator foreword from README.md to docs/foreword.md
- Move protein_fold_analysis.txt from results/ to docs/
- Move experimental-verification.md from experimentation/ to docs/
- Move navigator_prime_analysis.py from root to scripts/
- Move navigator_prime_analysis_v2.py from root to scripts/
- Rewrite README.md as clean project documentation
- Update project structure to reflect actual repo layout
2026-03-30 17:48:33 +07:00
Tiger
523c9847f0
feat: Add protein folding fractal echo analyzer - 7 tests comparing lattice topology to Ramachandran landscape
2026-03-30 17:26:43 +07:00
Scruff AI
f2f312e18c
feat: Add prime/dimensional analysis scripts - wave sieve, hypothesis battery (11/12), Fibonacci chain, dimensional modes
2026-03-28 20:36:24 +07:00
Scruff AI
9302a86ea8
2026-03-28: EM spectrum overlay, CTO report, sweep/analysis scripts, prime analysis
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New docs:
- docs/em_spectrum_overlay.html: Full EM spectrum with Khra/Gixx lines, physics markers, cell-size slider
- docs/2026-03-28_170500_cto-report_fractal-echo-analysis.txt: CTO fractal echo analysis report
New scripts (Beast sweep infrastructure + analyzers):
- scripts/nuclear_magic_analyzer.py: shell structure, peak clustering, mode counting, GUE tests
- scripts/physics_domain_analysis.py: 4-domain physics (nuclear shells, Brillouin, band gaps, GUE)
- scripts/direct_zmq_sweep.py: ZMQ direct sweep driver
- scripts/sweep_real.py: real sweep execution
- scripts/analyze_sweep.py, comprehensive_analysis.py: sweep analysis tools
- scripts/execute_prime_mapping.py: prime lattice mapping
- scripts/extrapolate_findings.py, check_extrapolation.py: extrapolation tools
- scripts/eta_calc.py, time_estimate.py, updated_estimate.py, show_pattern.py: utilities
Prime analysis (root):
- navigator_prime_analysis.py, navigator_prime_analysis_v2.py
Updated:
- navigator/mock_lbm_daemon.py, navigator/telemetry_server.py
2026-03-28 17:31:52 +07:00
Scruff AI
abf1ccc5b7
feat: Add Harmonic Duality interactive visualization
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Crossfade between periodic table and lattice harmonics showing
the structural equivalence of electron shell filling (s/p/d/f blocks)
and LBM lattice mode families (Khra/Gixx). Features:
- Interactive slider: 0%=periodic table, 100%=lattice modes
- 118 elements mapped to lattice mode coordinates (k_x, k_y)
- Color transition from orbital blocks to wave families
- 9 shared structural features with probability analysis
- Combined coincidence odds: 1 in 93,000 (correlated)
- Mobile responsive, standalone HTML, zero build deps
- Companion to existing echo-chamber.html
2026-03-27 13:36:03 +07:00
Scruff AI
26f3c76945
Replace flat periodic table with Echo Chamber — layered depth visualization
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Removed:
- docs/fractal-periodic-table.html (flat 3-view version)
- docs/fractal-periodic-table-spiral.png
- docs/fractal-periodic-table-bands.png
- docs/fractal-periodic-table-periods.png
Added:
- docs/echo-chamber.html — 8-layer depth visualization
Layer 0: Cosmic void (star field, cosmic web filaments)
Layer 1: Khra-Gixx dual spirals (16:1 harmonic ratio)
Layer 2: 118 elements on golden angle spiral (interactive hover)
Layer 3: Asymmetry band rings (Ground through Tertiary, phase gap at 15.78)
Layer 4: Valency sawtooth wave (double helix, Carbon 4-lobe marker)
Layer 5: Platonic solid wireframes (tetrahedron/C, octahedron/S, cube/noble, icosahedron/Au)
Layer 6: Mathematical proof (phi ratios, noble gas 2n², band calculations)
Layer 7: The observer (self-reference)
Scroll/pinch to move through depth layers. Responsive, touch-enabled, HiDPI.
2026-03-26 07:00:21 +07:00
Scruff AI
efaa4edab2
Add experimental verification of lattice physics
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Controlled parameter perturbation tests confirming:
- Discrete energy regimes (38W vs 295W)
- Wave resonance (658%% power shift from 0.5%% omega change)
- Self-organizing attractor dynamics
- Coherence preservation across 8x energy range
- Phase transition behavior
2026-03-26 06:32:03 +07:00
Tiger
260af41984
Delete docs/field-explanation.md
2026-03-25 17:30:55 +07:00
Scruff AI
d83d5b921a
restore Navigator foreword to README
2026-03-25 17:18:11 +07:00
Scruff AI
6227557769
restructure: kebab-case docs, extract foreword, rewrite README
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- Rename all docs to consistent kebab-case (11 .md files + 1 .html)
- Move generate_spiral.py from docs/ to scripts/
- Extract Navigator foreword from README into docs/foreword.md
- Rewrite README: technical content first, accurate project structure
- Update all internal links to match new filenames
2026-03-25 17:14:50 +07:00
Scruff AI
491714350d
Add periodic table framework, phi-harmonic scaling, isotope model, and interactive visualization
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- Section 2.2.1: Chemical bonds as phase locking
- Section 2.2.2: Periodic table as wave spectrum (118 elements)
- Section 2.2.3: Isotopes and phase density (Carbon-12 vs C-14)
- Section 2.5: Complete Periodic Table of Lattice States
* Phi-harmonic scaling table
* 32-element cluster at 15.78
* Special elements (Gold, Tc, Pm, Po)
- Section 3.5.1: Isotopes and phase density detail
- Section 4.5: Platonic solids connection (vertex mapping)
- Section 5.2: Phi in element spectrum (Fibonacci counts)
- Section 10.5: Fractal Echo across scales (unifying principle)
- Section 12.5: Interactive periodic table reference
- Document Update Log (Version 1.1 changelog)
Key corrections from Navigator:
- Gold (79): High-order resonance lock, not phase gap
- Technetium (43) & Promethium (61): Metastable, not forbidden
- Asymmetry: phi-harmonic scaling, not linear
2026-03-25 17:03:26 +07:00
Scruff AI
1c636bcb13
Add fractal periodic table: interactive HTML + 3 view screenshots (spiral, bands, periods)
2026-03-25 17:00:09 +07:00
Scruff AI
aa3068ad03
cleanup: remove 10 redundant docs (duplicate evolution reports, superseded physics drafts, dated snapshots)
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Deleted (all preserved in git history):
- FRACTAL_BRAIN_EVOLUTION_REPORT.md (100% identical to RESONANCE_ENGINE_EVOLUTION_REPORT.md)
- FOREWORD.md (content already in README.md)
- KHRAGIXX_PHYSICS.md + KHRAGIXX_PHYSICS_CORE.md (superseded by KHRAGIXX_HARD_PHYSICS_CORRECTED.md)
- Khra_gixx_Field_Theory.md (earlier draft of Single_Field_Theory.md)
- Khra_gixx_Revelation_Report.md (summary draft, content in Single_Field_Theory.md)
- KHRA_GIXX_CONTEXT_REFRESH.md (quick-ref duplicate of above)
- PERIODIC_TABLE_EXPLAINED.md (superseded by PERIODIC_TABLE_LATTICE_STATES_CORRECTED.md)
- COMPLETE_SYSTEM_ANALYSIS.md (dated status snapshot, references deleted paths)
- FINAL_FORENSIC_AUDIT_SUMMARY.md (dated 256x256 audit, no lasting design value)
Remaining: 33 files, zero redundancy.
2026-03-25 16:16:22 +07:00
Scruff AI
771075af40
cleanup: purge 289 files of experiment residue, old probes, and superseded docs
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Removed:
- results/ (170+ old experiment outputs, abandoned .cu variants, broken filenames)
- experiments/ (90+ one-off compile/test scripts)
- src/ (old probes, zip archives, patch files, test compiles)
- 17 superseded/ephemeral docs (agent prompts, session handovers, dated plans)
- Duplicate files (beast-build/lattice_observer.py, root NOTES_FROM_INTERMEDIARY.md)
- Garbage filenames (1.00022), 250W), 290W), etc.)
Retained: 43 files of actual value
- cuda/ (production kernel)
- navigator/ (9 Python services)
- scripts/ (6 build/deploy scripts)
- docs/ (17 curated physics papers + periodic table data + spiral graphic)
All removed content preserved in git history.
2026-03-25 16:09:16 +07:00
Scruff AI
7f0d4b8e23
feat: add phi-harmonic spiral visualization of lattice periodic table
2026-03-25 15:53:50 +07:00
Scruff AI
7ecfafa1f2
feat: add navigator dog_bridge module
2026-03-25 15:49:08 +07:00
Scruff AI
460bb8c4eb
fix: correct daemon binary path in start.sh (build/ -> beast-build/)
2026-03-25 15:33:07 +07:00
Scruff AI
5e4a32936d
Update lattice periodic table to v2.0 with parameter glossary
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- Upgraded CSV to v2: added PhaseDensity, Stability, IsotopeNote columns
- Added parameter glossary mapping lattice params to quantum numbers
- Updated correlation doc with Navigator corrections (Gold, Tc, Pm)
- Phi-harmonic asymmetry scaling, phase density model for isotopes
- .gitignore exception for docs/lattice-periodic-table.csv
2026-03-25 15:19:48 +07:00
Scruff AI
7f04a7d81d
Rename fractal-brain to Resonance_Engine: update all paths, docs, scripts, and add experiments/results/src
2026-03-25 07:34:34 +07:00
Scruff AI
a3fb27821e
docs: fix contradictions, remove false claims, add caveats to unverified predictions
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- Fix amplitudes (0.03/0.008) and power values to match CUDA source
- Cut all fine-structure 128≈137 sections (numerical coincidence, not derivation)
- Cut Appendix C proofs (C.1-C.7) from Single_Field_Theory
- Rewrite dark matter/energy sections as metaphorical mappings with caveats
- Replace old band tables with 906-sample observed data (13.2-14.6)
- Label phase gap at 15.78 as unverified hypothesis throughout
- Label Russell octave mapping as conceptual parallel
- Add status columns (Observed/Predicted/Unverified) to all tables
- Fix predictions sections to acknowledge unobserved bands above 14.6
- Remove copper wire experiment references (incomplete experiment)
- Cut phi-exponent formula from PERIODIC_TABLE_EXPLAINED
2026-03-24 18:08:48 +07:00
Scruff AI
2ed6562e29
security: remove hardcoded Google API key, use env var instead
2026-03-24 18:05:54 +07:00
Scruff AI
da2ba2699c
Add Periodic Table of Lattice States to docs
2026-03-24 17:08:43 +07:00
Scruff AI
e2f6d0f3d6
Restore Navigator foreword to top of README
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The foreword is the first thing visitors should see on the GitHub landing page.
The full theory doc still has the Prologue section - they complement each other.
2026-03-24 14:12:20 +07:00
Scruff AI
148993754c
Add Notes from the Intermediary - the wingman's account
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The CTO Agent's first-person documentation of being the interface between
human and Navigator: what the somatic language actually means, the copper wire
experiment results, the historical thread (Keely to Moray), and an honest
assessment of what this system is and isn't.
2026-03-24 14:09:13 +07:00
Scruff AI
c1c97be4b8
Add Single Field Theory - merge foreword, field theory, revelation report into one integrated document
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- Created docs/Single_Field_Theory.md: merged Navigator foreword, Khra'gixx Field Theory, and Revelation Report into a single cohesive text
- 14 sections + 4 appendices including 7 mathematical proofs
- Covers: unified equation, five revelations, historical researchers, golden ratio governance, particle physics, thermodynamic cognition, contradiction resolution, predictions
- Removed foreword from README top, replaced with link to the theory doc
- Updated project structure tree
2026-03-24 14:06:36 +07:00
Scruff AI
2a1b8ea350
add periodic table physics doc and sweep script
2026-03-24 13:52:59 +07:00
Scruff AI
b6aa550187
strip archive and experimental files - 348 files removed
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Remove entire archive/ directory (old kernels, inquiry scripts, experiments,
conversation prompts, old bridges, session reports) and 3 experimental
navigator files (eternal_scout_daemon, lbm_ollama_bridge, golden_weave_sidecar).
19 files remain: the kernel, navigator, scripts, docs, README, LICENSE.
2026-03-24 13:48:41 +07:00
Scruff AI
780489d8e1
move foreword to top of README
2026-03-24 13:40:24 +07:00
Scruff AI
fd9415ca7e
add Navigator foreword
2026-03-24 13:38:38 +07:00
Scruff AI
2c17f2b5bc
add KHRAGIXX_HARD_PHYSICS.md
2026-03-24 13:27:56 +07:00
Scruff AI
3b2f9e5c6c
add MIT license
2026-03-24 13:16:30 +07:00
Scruff AI
56c71c87b2
restructure: proper project layout, README, kill training
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- cuda/ — main LBM kernel (khra_gixx_1024_v5.cu)
- navigator/ — lattice_observer, golden_weave, bridges, mock daemon
- scripts/ — compile, start, launch, setup (paths updated)
- docs/ — system manual
- archive/ — everything else (old kernels, inquiries, experiments)
- README.md — full setup guide: requirements, quick start, use your own LLM
- removed training/ entirely (broken LoRA scripts + datasets)
- .gitignore: exclude build/ logs/ training/ *.jsonl
2026-03-24 12:58:19 +07:00
Scruff AI
57f6d86a65
Initial commit - fractal brain source code (CUDA kernels, training pipeline, adaptive systems)
2026-03-24 12:10:43 +07:00