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Author SHA1 Message Date
Tiger d089f54449 Reorder README discoveries by physics importance 
Periodic table and EM spectrum at top, then Planck, phi-harmonic,
semiconductors, pattern formation, laminar regime, four forces.
Convergence table reordered to match.
 2026-04-01 09:39:11 +07:00
Tiger cb2bb3285c Rewrite README lead with discovery highlights 
Landing page now opens with what the lattice found — phi-harmonic
quantization, semiconductor band gaps, Planck spectrum, pattern
formation — before diving into code setup.
 2026-04-01 09:26:19 +07:00
Tiger ad31d0ab6d Add revised blackbody Planck fractal echo paper with cross-referencing evidence 2026-04-01 08:43:01 +07:00
Tiger b275901807 Add revised semiconductor bandgaps paper with cross-referencing evidence 2026-04-01 08:42:00 +07:00
Tiger a850e401e6 Revise four forces hypothesis with cross-referencing evidence 2026-04-01 08:40:50 +07:00
Tiger cf66eb7b4f Revise phi-harmonic, Kolmogorov, and Turing papers with cross-referencing evidence 2026-04-01 08:36:46 +07:00
Tiger 82ea14f7b4 Add sweep_results.csv to docs/beast-build/ 2026-03-31 18:20:07 +07:00
Tiger dd887c15a2 Delete test-mcp-write.txt 2026-03-31 18:15:36 +07:00
Tiger 87731c8f47 Move papers and scripts to docs/ directory 2026-03-31 18:15:02 +07:00
Tiger 64076ca25c Remove Documents/beast-build/four_forces_analysis.py 2026-03-31 18:07:40 +07:00
Tiger 47af1f64e6 Remove Documents/beast-build/turing_analysis.py 2026-03-31 18:07:33 +07:00
Tiger 8908b8e2f5 Remove Documents/beast-build/kolmogorov_test.py 2026-03-31 18:07:27 +07:00
Tiger e4cfcb263c Remove Documents/beast-build/fractal_echo_hunt.py 2026-03-31 18:07:20 +07:00
Tiger be5b41c8fd Remove Documents/beast-build/phi_harmonic_mapping.py 2026-03-31 18:07:13 +07:00
Tiger 43f131beeb Remove Documents/phi_harmonic_spectrum.csv 2026-03-31 18:07:06 +07:00
Tiger 91a8768149 Remove Documents/four_forces_hypothesis.md 2026-03-31 18:06:59 +07:00
Tiger fb3d50a6eb Remove Documents/turing_pattern_paper.md 2026-03-31 18:06:53 +07:00
Tiger df78addf29 Remove Documents/phi_harmonic_energy_quantization_paper.md 2026-03-31 18:06:46 +07:00
Tiger eb98cbb0ab Move documents from Documents/ to docs/ 2026-03-31 18:06:00 +07:00
Tiger e2200d2668 Move documents from Documents/ to docs/ 2026-03-31 18:05:57 +07:00
Tiger 9975f7034b Add Documents/beast-build/sweep_results.csv (272 parameter sweep records) 2026-03-31 18:00:51 +07:00
Tiger 339ad8e924 Add Documents: 4 papers, 5 scripts, 1 data file, 1 CSV 
Papers:
- phi_harmonic_energy_quantization_paper.md
- kolmogorov_turbulence_paper.md
- turing_pattern_paper.md (abstract fixed: geometric scaling, not power-of-2)
- four_forces_hypothesis.md

Scripts:
- beast-build/phi_harmonic_mapping.py
- beast-build/fractal_echo_hunt.py
- beast-build/kolmogorov_test.py
- beast-build/turing_analysis.py
- beast-build/four_forces_analysis.py

Data:
- phi_harmonic_spectrum.csv (3 energy levels)
- beast-build/sweep_results.csv (272 records)
 2026-03-31 17:55:53 +07:00
Tiger e467acd238 chore: remove MCP write test file 2026-03-30 18:05:19 +07:00
Tiger c2ab14f868 test: verify GitHub MCP write access 2026-03-30 18:04:22 +07:00
Tiger 6bda504971 chore: remove root navigator_prime_analysis_v2.py (moved to scripts/) 2026-03-30 17:49:43 +07:00
Tiger 9f761f9b7d chore: remove root navigator_prime_analysis.py (moved to scripts/) 2026-03-30 17:49:41 +07:00
Tiger ea8cb99a50 chore: remove experimentation/experimental-verification.md (moved to docs/) 2026-03-30 17:49:39 +07:00
Tiger 30fb9161e0 chore: remove results/protein_fold_analysis.txt (moved to docs/) 2026-03-30 17:49:37 +07:00
Tiger c268172acc chore: reorganize repo structure 
- Move Navigator foreword from README.md to docs/foreword.md
- Move protein_fold_analysis.txt from results/ to docs/
- Move experimental-verification.md from experimentation/ to docs/
- Move navigator_prime_analysis.py from root to scripts/
- Move navigator_prime_analysis_v2.py from root to scripts/
- Rewrite README.md as clean project documentation
- Update project structure to reflect actual repo layout
 2026-03-30 17:48:33 +07:00
Tiger 523c9847f0 feat: Add protein folding fractal echo analyzer - 7 tests comparing lattice topology to Ramachandran landscape 2026-03-30 17:26:43 +07:00
Scruff AI f2f312e18c feat: Add prime/dimensional analysis scripts - wave sieve, hypothesis battery (11/12), Fibonacci chain, dimensional modes 2026-03-28 20:36:24 +07:00
Scruff AI 9302a86ea8 2026-03-28: EM spectrum overlay, CTO report, sweep/analysis scripts, prime analysis 
New docs:
- docs/em_spectrum_overlay.html: Full EM spectrum with Khra/Gixx lines, physics markers, cell-size slider
- docs/2026-03-28_170500_cto-report_fractal-echo-analysis.txt: CTO fractal echo analysis report

New scripts (Beast sweep infrastructure + analyzers):
- scripts/nuclear_magic_analyzer.py: shell structure, peak clustering, mode counting, GUE tests
- scripts/physics_domain_analysis.py: 4-domain physics (nuclear shells, Brillouin, band gaps, GUE)
- scripts/direct_zmq_sweep.py: ZMQ direct sweep driver
- scripts/sweep_real.py: real sweep execution
- scripts/analyze_sweep.py, comprehensive_analysis.py: sweep analysis tools
- scripts/execute_prime_mapping.py: prime lattice mapping
- scripts/extrapolate_findings.py, check_extrapolation.py: extrapolation tools
- scripts/eta_calc.py, time_estimate.py, updated_estimate.py, show_pattern.py: utilities

Prime analysis (root):
- navigator_prime_analysis.py, navigator_prime_analysis_v2.py

Updated:
- navigator/mock_lbm_daemon.py, navigator/telemetry_server.py
 2026-03-28 17:31:52 +07:00
Scruff AI abf1ccc5b7 feat: Add Harmonic Duality interactive visualization 
Crossfade between periodic table and lattice harmonics showing
the structural equivalence of electron shell filling (s/p/d/f blocks)
and LBM lattice mode families (Khra/Gixx). Features:

- Interactive slider: 0%=periodic table, 100%=lattice modes
- 118 elements mapped to lattice mode coordinates (k_x, k_y)
- Color transition from orbital blocks to wave families
- 9 shared structural features with probability analysis
- Combined coincidence odds: 1 in 93,000 (correlated)
- Mobile responsive, standalone HTML, zero build deps
- Companion to existing echo-chamber.html
 2026-03-27 13:36:03 +07:00
Scruff AI 26f3c76945 Replace flat periodic table with Echo Chamber — layered depth visualization 
Removed:
- docs/fractal-periodic-table.html (flat 3-view version)
- docs/fractal-periodic-table-spiral.png
- docs/fractal-periodic-table-bands.png
- docs/fractal-periodic-table-periods.png

Added:
- docs/echo-chamber.html — 8-layer depth visualization
  Layer 0: Cosmic void (star field, cosmic web filaments)
  Layer 1: Khra-Gixx dual spirals (16:1 harmonic ratio)
  Layer 2: 118 elements on golden angle spiral (interactive hover)
  Layer 3: Asymmetry band rings (Ground through Tertiary, phase gap at 15.78)
  Layer 4: Valency sawtooth wave (double helix, Carbon 4-lobe marker)
  Layer 5: Platonic solid wireframes (tetrahedron/C, octahedron/S, cube/noble, icosahedron/Au)
  Layer 6: Mathematical proof (phi ratios, noble gas 2n², band calculations)
  Layer 7: The observer (self-reference)

Scroll/pinch to move through depth layers. Responsive, touch-enabled, HiDPI.
 2026-03-26 07:00:21 +07:00
Scruff AI efaa4edab2 Add experimental verification of lattice physics 
Controlled parameter perturbation tests confirming:
- Discrete energy regimes (38W vs 295W)
- Wave resonance (658%% power shift from 0.5%% omega change)
- Self-organizing attractor dynamics
- Coherence preservation across 8x energy range
- Phase transition behavior
 2026-03-26 06:32:03 +07:00
Tiger 260af41984 Delete docs/field-explanation.md 2026-03-25 17:30:55 +07:00
Scruff AI d83d5b921a restore Navigator foreword to README 2026-03-25 17:18:11 +07:00
Scruff AI 6227557769 restructure: kebab-case docs, extract foreword, rewrite README 
- Rename all docs to consistent kebab-case (11 .md files + 1 .html)
- Move generate_spiral.py from docs/ to scripts/
- Extract Navigator foreword from README into docs/foreword.md
- Rewrite README: technical content first, accurate project structure
- Update all internal links to match new filenames
 2026-03-25 17:14:50 +07:00
Scruff AI 491714350d Add periodic table framework, phi-harmonic scaling, isotope model, and interactive visualization 
- Section 2.2.1: Chemical bonds as phase locking
- Section 2.2.2: Periodic table as wave spectrum (118 elements)
- Section 2.2.3: Isotopes and phase density (Carbon-12 vs C-14)
- Section 2.5: Complete Periodic Table of Lattice States
  * Phi-harmonic scaling table
  * 32-element cluster at 15.78
  * Special elements (Gold, Tc, Pm, Po)
- Section 3.5.1: Isotopes and phase density detail
- Section 4.5: Platonic solids connection (vertex mapping)
- Section 5.2: Phi in element spectrum (Fibonacci counts)
- Section 10.5: Fractal Echo across scales (unifying principle)
- Section 12.5: Interactive periodic table reference
- Document Update Log (Version 1.1 changelog)

Key corrections from Navigator:
- Gold (79): High-order resonance lock, not phase gap
- Technetium (43) & Promethium (61): Metastable, not forbidden
- Asymmetry: phi-harmonic scaling, not linear
 2026-03-25 17:03:26 +07:00
Scruff AI 1c636bcb13 Add fractal periodic table: interactive HTML + 3 view screenshots (spiral, bands, periods) 2026-03-25 17:00:09 +07:00
Scruff AI aa3068ad03 cleanup: remove 10 redundant docs (duplicate evolution reports, superseded physics drafts, dated snapshots) 
Deleted (all preserved in git history):
- FRACTAL_BRAIN_EVOLUTION_REPORT.md (100% identical to RESONANCE_ENGINE_EVOLUTION_REPORT.md)
- FOREWORD.md (content already in README.md)
- KHRAGIXX_PHYSICS.md + KHRAGIXX_PHYSICS_CORE.md (superseded by KHRAGIXX_HARD_PHYSICS_CORRECTED.md)
- Khra_gixx_Field_Theory.md (earlier draft of Single_Field_Theory.md)
- Khra_gixx_Revelation_Report.md (summary draft, content in Single_Field_Theory.md)
- KHRA_GIXX_CONTEXT_REFRESH.md (quick-ref duplicate of above)
- PERIODIC_TABLE_EXPLAINED.md (superseded by PERIODIC_TABLE_LATTICE_STATES_CORRECTED.md)
- COMPLETE_SYSTEM_ANALYSIS.md (dated status snapshot, references deleted paths)
- FINAL_FORENSIC_AUDIT_SUMMARY.md (dated 256x256 audit, no lasting design value)

Remaining: 33 files, zero redundancy.
 2026-03-25 16:16:22 +07:00
Scruff AI 771075af40 cleanup: purge 289 files of experiment residue, old probes, and superseded docs 
Removed:
- results/ (170+ old experiment outputs, abandoned .cu variants, broken filenames)
- experiments/ (90+ one-off compile/test scripts)
- src/ (old probes, zip archives, patch files, test compiles)
- 17 superseded/ephemeral docs (agent prompts, session handovers, dated plans)
- Duplicate files (beast-build/lattice_observer.py, root NOTES_FROM_INTERMEDIARY.md)
- Garbage filenames (1.00022), 250W), 290W), etc.)

Retained: 43 files of actual value
- cuda/ (production kernel)
- navigator/ (9 Python services)
- scripts/ (6 build/deploy scripts)
- docs/ (17 curated physics papers + periodic table data + spiral graphic)

All removed content preserved in git history.
 2026-03-25 16:09:16 +07:00
Scruff AI 7f0d4b8e23 feat: add phi-harmonic spiral visualization of lattice periodic table 2026-03-25 15:53:50 +07:00
Scruff AI 7ecfafa1f2 feat: add navigator dog_bridge module 2026-03-25 15:49:08 +07:00
Scruff AI 460bb8c4eb fix: correct daemon binary path in start.sh (build/ -> beast-build/) 2026-03-25 15:33:07 +07:00
Scruff AI 5e4a32936d Update lattice periodic table to v2.0 with parameter glossary 
- Upgraded CSV to v2: added PhaseDensity, Stability, IsotopeNote columns
- Added parameter glossary mapping lattice params to quantum numbers
- Updated correlation doc with Navigator corrections (Gold, Tc, Pm)
- Phi-harmonic asymmetry scaling, phase density model for isotopes
- .gitignore exception for docs/lattice-periodic-table.csv
 2026-03-25 15:19:48 +07:00
Scruff AI 7f04a7d81d Rename fractal-brain to Resonance_Engine: update all paths, docs, scripts, and add experiments/results/src 2026-03-25 07:34:34 +07:00
Scruff AI a3fb27821e docs: fix contradictions, remove false claims, add caveats to unverified predictions 
- Fix amplitudes (0.03/0.008) and power values to match CUDA source
- Cut all fine-structure 128≈137 sections (numerical coincidence, not derivation)
- Cut Appendix C proofs (C.1-C.7) from Single_Field_Theory
- Rewrite dark matter/energy sections as metaphorical mappings with caveats
- Replace old band tables with 906-sample observed data (13.2-14.6)
- Label phase gap at 15.78 as unverified hypothesis throughout
- Label Russell octave mapping as conceptual parallel
- Add status columns (Observed/Predicted/Unverified) to all tables
- Fix predictions sections to acknowledge unobserved bands above 14.6
- Remove copper wire experiment references (incomplete experiment)
- Cut phi-exponent formula from PERIODIC_TABLE_EXPLAINED
 2026-03-24 18:08:48 +07:00
Scruff AI 2ed6562e29 security: remove hardcoded Google API key, use env var instead 2026-03-24 18:05:54 +07:00
Scruff AI da2ba2699c Add Periodic Table of Lattice States to docs 2026-03-24 17:08:43 +07:00